Changelog

Source: NEWS.md

qcmetrics 1.41

qcmetrics 1.41.1

  • Fix bug when when setting the env.
  • Remove template reporting argument.

qcmetrics 1.31

qcmetrics 1.31.1

  • Suggest rmarkdown to fix build error

qcmetrics 1.29

qcmetrics 1.29.1

  • Clean up (remove .gitignores for branch-specific .gitingore, README.Rmd).
  • Remove dependency on yaqcaffy (that is being deprecated).

qcmetrics 1.29.0

  • The Bioc devel version

qcmetrics 1.25

CHANGES IN VERSION 1.25.1

  • update email

qcmetrics 1.19

CHANGES IN VERSION 1.19.2

  • Use BiocManager::install <2018-09-03 Mon>

CHANGES IN VERSION 1.19.1

  • replace BiocInstaller biocLite mentions with BiocManager (from Bioc core)

CHANGES IN VERSION 1.19.0

  • New version for Bioc devel

qcmetrics 1.18

CHANGES IN VERSION 1.18.0

  • New version for Bioc release

qcmetrics 1.17

CHANGES IN VERSION 1.17.1

  • Remove deprecated html_document2 <2018-01-16 Tue>

qcmetrics 1.15

CHANGES IN VERSION 1.15.2

  • Merge PR by aoles to re-use BiocStyle (see commit 381d01d1c4dcced040f77a447962cd7865cb7417 for details) <2017-10-27 Fri>

CHANGES IN VERSION 1.15.1

  • Don’t user BiocStyle for vignette to allow to knit documents from within the vignette. This was needed to fix the error at build time. <2017-10-25 Wed>

CHANGES IN VERSION 1.15.0

  • Bioconductor devel

CHANGES IN VERSION 1.14.0

  • Bioconductor release

CHANGES IN VERSION 1.13.1

  • add imports in NAMESPACE <2016-12-28 Wed>
  • use NEWS.md <2016-12-28 Wed>
  • Rmd landing vignette <2016-12-28 Wed>

CHANGES IN VERSION 1.13.0

  • Bioc devel 3.5

qcmetrics 1.12

  • Bioc release 3.4

qcmetrics 1.11

CHANGES IN VERSION 1.11.3

  • Ammend biocViews <2016-09-23 Fri>

qcmetrics 1.9

CHANGES IN VERSION 1.9.1

  • QcMetric-bjects now have a description slots, and associated accessor and replacement methods <2015-11-18 Wed>

qcmetrics 1.5

CHANGES IN VERSION 1.5.1

  • Using Biocstyle [2015-01-23 Fri]

qcmetrics 1.3

CHANGES IN VERSION 1.3.1

  • using S4Vectors’ metadata and metadata<- [2014-06-16 Mon]

CHANGES IN VERSION 1.3.0

  • new devel version, Bioc 3.0

qcmetrics 1.1

CHANGES IN VERSION 1.1.1

  • added ReportWriting biocView [2013-11-29 Fri]

CHANGES IN VERSION 1.1.0

  • new devel version

qcmetrics 0.99

CHANGES IN VERSION 0.99.3

  • fixed template - toc after begin document <2013-10-01 Tue>
  • updates to vignette <2013-10-01 Tue>
  • re-reoxygenise rnadeg man <2013-10-01 Tue>

CHANGES IN VERSION 0.99.2

  • Implemented Andrzej’s suggestions <2013-09-27 Fri>

CHANGES IN VERSION 0.99.1

  • Updated github README file <2013-09-18 Wed>
  • Added Arnoud’s suggestions to vig <2013-09-21 Sat>
  • rnadeg wrapper function available in the package <2013-09-21 Sat>
  • new QcMetadata class <2013-09-21 Sat>
  • metadata and mdata synonym <2013-09-21 Sat>
  • added metadata section in knitr reports <2013-09-21 Sat>
  • selectively import pander::pander.table to fix warning uppon installation <2013-09-21 Sat>
  • added n15qc wrapper <2013-09-21 Sat>

CHANGES IN VERSION 0.99.0

  • submission to Bioconductor <2013-09-17 Tue>