Returns a data.frame of amino acid properties: AA,
ResidueMass, Abbrev3, ImmoniumIonMass,
Name, Hydrophobicity, Hydrophilicity,
SideChainMass, pK1, pK2 and pI.
get.amino.acids()A data.frame
get.amino.acids()
#> AA ResidueMass Abbrev3 ImmoniumIonMass Name Hydrophobicity
#> 1 peg 44.00000 <NA> NA Polyethylene glycol NA
#> 2 A 71.03711 Ala 44.05003 Alanine 0.62
#> 3 R 156.10111 Arg 129.11400 Arginine -2.53
#> 4 N 114.04293 Asn 87.05584 Asparagine -0.78
#> 5 D 115.02694 Asp 88.03986 Aspartic acid -0.90
#> 6 C 103.00919 Cys 76.02210 Cysteine 0.29
#> 7 E 129.04259 Glu 102.05550 Glutamic acid -0.74
#> 8 Q 128.05858 Gln 101.07150 Glutamine -0.85
#> 9 G 57.02146 Gly 30.03438 Glycine 0.48
#> 10 H 137.05891 His 110.07180 Histidine -0.40
#> 11 I 113.08406 Ile 86.09698 Isoleucine 1.38
#> 12 L 113.08406 Leu 86.09698 Leucine 1.06
#> 13 K 128.09496 Lys 101.10790 Lysine -1.50
#> 14 M 131.04049 Met 104.05340 Methionine 0.64
#> 15 F 147.06841 Phe 120.08130 Phenylalanine 1.19
#> 16 P 97.05276 Pro 70.06568 Proline 0.12
#> 17 S 87.03203 Ser 60.04494 Serine -0.18
#> 18 T 101.04768 Thr 74.06059 Threonine -0.05
#> 19 W 186.07931 Trp 159.09220 Tryptophan 0.81
#> 20 Y 163.06333 Tyr 136.07620 Tyrosine 0.26
#> 21 V 99.06841 Val 72.08133 Valine 1.08
#> Hydrophilicity SideChainMass pK1 pK2 pI
#> 1 NA NA NA NA NA
#> 2 -0.5 15 2.35 9.87 6.11
#> 3 3.0 101 2.18 9.09 10.76
#> 4 0.2 58 2.18 9.09 10.76
#> 5 3.0 59 1.88 9.60 2.98
#> 6 -1.0 47 1.71 10.78 5.02
#> 7 3.0 73 2.19 9.67 3.08
#> 8 0.2 72 2.17 9.13 5.65
#> 9 0.0 1 2.34 9.60 6.06
#> 10 -0.5 82 1.78 8.97 7.64
#> 11 -1.8 57 2.32 9.76 6.04
#> 12 -1.8 57 2.36 9.60 6.04
#> 13 3.0 73 2.20 8.90 9.47
#> 14 -1.3 75 2.28 9.21 5.74
#> 15 -2.5 91 2.58 9.24 5.91
#> 16 0.0 42 1.99 10.60 6.30
#> 17 0.3 31 2.21 9.15 5.68
#> 18 -0.4 45 2.15 9.12 5.60
#> 19 -3.4 130 2.38 9.39 5.88
#> 20 -2.3 107 2.20 9.11 5.63
#> 21 -1.5 43 2.29 9.74 6.02