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Laurent Gatto

Open science, reproducible research, data champion, computational biology, proteomics, more omics, emacs, a lot of R, quite a bit of running, and parenting.

Installing and running MaxQuant on GNU/Linux

4 minute read

After a first analysis of 20 plasma samples, we wanted to compare the results of a single acquisition against a fractionation of the same samples over 7 frac...

First ungrading assessment

7 minute read

Here’s the initial assessment of the new ungrading and feedback pedagogy that the TAs and myself have implemented this academic year (2022-2023). In a nutshe...

Ungrading my teaching

15 minute read

I have been extremely lucky to participate in a Carpentries instructor training as an early career researcher. By then, I had only taught a few workshops, an...

Notes on software licenses

3 minute read

This post was motivated by the preparation of a the CytoPipeline package and the following question about software licenses. The CytoPipeline package is deve...

Tribute to my first running watch

1 minute read

I have recently acquired a new running watch and wanted to give a little tribute to my TomTom runner watch that has accompanied my for just over 6 years and ...