Session information
The version of R and all packages used to generate this material are documented below.
sessionInfo()## R version 3.4.2 Patched (2017-10-03 r73455)
## Platform: x86_64-pc-linux-gnu (64-bit)
## Running under: Ubuntu 14.04.5 LTS
##
## Matrix products: default
## BLAS: /usr/lib/atlas-base/libf77blas.so.3.0
## LAPACK: /usr/lib/lapack/liblapack.so.3.0
##
## locale:
## [1] LC_CTYPE=en_GB.UTF-8 LC_NUMERIC=C
## [3] LC_TIME=en_GB.UTF-8 LC_COLLATE=en_GB.UTF-8
## [5] LC_MONETARY=en_GB.UTF-8 LC_MESSAGES=en_GB.UTF-8
## [7] LC_PAPER=en_GB.UTF-8 LC_NAME=C
## [9] LC_ADDRESS=C LC_TELEPHONE=C
## [11] LC_MEASUREMENT=en_GB.UTF-8 LC_IDENTIFICATION=C
##
## attached base packages:
## [1] methods stats graphics grDevices utils datasets base
##
## other attached packages:
## [1] sequences_0.5.9 Rcpp_0.12.13 roxygen2_6.0.1 devtools_1.13.3
## [5] gridExtra_2.3 bindrcpp_0.2 purrr_0.2.4 readr_1.1.1
## [9] tidyr_0.7.2 tibble_1.3.4 tidyverse_1.1.1 lubridate_1.6.0
## [13] shiny_1.0.5 ggvis_0.4.3 ggplot2_2.2.1 dplyr_0.7.4
## [17] BiocStyle_2.5.43 knitr_1.17 DT_0.2
##
## loaded via a namespace (and not attached):
## [1] msdata_0.17.1 lattice_0.20-35 assertthat_0.2.0 rprojroot_1.2
## [5] digest_0.6.12 psych_1.7.8 mime_0.5 R6_2.2.2
## [9] cellranger_1.1.0 plyr_1.8.4 backports_1.1.1 evaluate_0.10.1
## [13] highr_0.6 httr_1.3.1 rlang_0.1.2 lazyeval_0.2.0
## [17] readxl_1.0.0 rstudioapi_0.7 rmarkdown_1.6 labeling_0.3
## [21] stringr_1.2.0 foreign_0.8-69 htmlwidgets_0.9 munsell_0.4.3
## [25] broom_0.4.2 compiler_3.4.2 httpuv_1.3.5 modelr_0.1.1
## [29] pkgconfig_2.0.1 mnormt_1.5-5 htmltools_0.3.6 tidyselect_0.2.2
## [33] bookdown_0.5 withr_2.0.0 commonmark_1.4 grid_3.4.2
## [37] nlme_3.1-131 jsonlite_1.5 xtable_1.8-2 gtable_0.2.0
## [41] magrittr_1.5 scales_0.5.0 stringi_1.1.5 reshape2_1.4.2
## [45] xml2_1.1.1 tools_3.4.2 forcats_0.2.0 glue_1.2.0
## [49] hms_0.3 parallel_3.4.2 yaml_2.1.14 colorspace_1.3-2
## [53] rvest_0.3.2 memoise_1.1.0 bindr_0.1 haven_1.1.0